Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Slc38a8 MGP_PahariEiJ_G0023217

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Description

solute carrier family 38 member 8 [Source:NCBI gene;Acc:110337720]

Location

Chromosome 20: 42,667,983-42,690,143 reverse strand.

PAHARI_EIJ_v1.1:LT608293.1

About this gene

This gene has 6 transcripts (splice variants), 286 orthologues and 15 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0054437.1	Slc38a8-201	2664	432aa	MGP_PahariEiJ_P0054437	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0054439.1	Slc38a8-203	840	279aa	MGP_PahariEiJ_P0054439	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0054441.1	Slc38a8-205	724	206aa	MGP_PahariEiJ_P0054441	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0054442.1	Slc38a8-206	717	165aa	MGP_PahariEiJ_P0054442	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0054440.1	Slc38a8-204	911	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0054438.1	Slc38a8-202	1305	434aa	MGP_PahariEiJ_P0054438	Unknown likely coding	-

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Summary

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