Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Gpt2 MGP_PahariEiJ_G0022942

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Description

glutamic--pyruvic transaminase 2 [Source:NCBI gene;Acc:110337340]

Location

Chromosome 20: 9,912,677-9,947,354 forward strand.

PAHARI_EIJ_v1.1:LT608293.1

About this gene

This gene has 5 transcripts (splice variants), 180 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0053668.1	Gpt2-201	3598	522aa	MGP_PahariEiJ_P0053668	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0053669.1	Gpt2-202	3213	158aa	MGP_PahariEiJ_P0053669	Nonsense mediated decay	-
MGP_PahariEiJ_T0053672.1	Gpt2-205	629	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_PahariEiJ_T0053670.1	Gpt2-203	472	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_PahariEiJ_T0053671.1	Gpt2-204	728	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Summary

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