Description
SRY (sex determining region Y)-box 5 [Source:MGI Symbol;Acc:MGI:98367]
Location
Chromosome 2: 158,391,255-159,339,337 reverse strand.
PAHARI_EIJ_v1.1:LT608286.1
About this gene
This gene has 14 transcripts (splice variants), 216 orthologues and 19 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | Flags |
|---|---|---|---|---|---|---|
| MGP_PahariEiJ_T0053114.1 | Sox5-201 | 7235 | 763aa | MGP_PahariEiJ_P0053114 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, |
| MGP_PahariEiJ_T0053115.1 | Sox5-202 | 7163 | 714aa | MGP_PahariEiJ_P0053115 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - |
| MGP_PahariEiJ_T0053116.1 | Sox5-203 | 3933 | 679aa | MGP_PahariEiJ_P0053116 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - |
| MGP_PahariEiJ_T0053118.1 | Sox5-205 | 2514 | 715aa | MGP_PahariEiJ_P0053118 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - |
| MGP_PahariEiJ_T0053117.1 | Sox5-204 | 1731 | 392aa | MGP_PahariEiJ_P0053117 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - |
| MGP_PahariEiJ_T0053121.1 | Sox5-208 | 676 | 184aa | MGP_PahariEiJ_P0053121 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - |
| MGP_PahariEiJ_T0053122.1 | Sox5-209 | 620 | 135aa | MGP_PahariEiJ_P0053122 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - |
| MGP_PahariEiJ_T0053125.1 | Sox5-212 | 1947 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - |
| MGP_PahariEiJ_T0053119.1 | Sox5-206 | 1230 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - |
| MGP_PahariEiJ_T0053126.1 | Sox5-213 | 351 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - |
| MGP_PahariEiJ_T0053124.1 | Sox5-211 | 2958 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - |
| MGP_PahariEiJ_T0053120.1 | Sox5-207 | 2810 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - |
| MGP_PahariEiJ_T0053123.1 | Sox5-210 | 2464 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - |
| MGP_PahariEiJ_T0053127.1 | Sox5-214 | 620 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - |
