Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: H2-Aa MGP_PahariEiJ_G0020449

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Description

H-2 class II histocompatibility antigen, A-B alpha chain [Source:NCBI gene;Acc:110335565]

Location

Chromosome 18: 2,179,941-2,186,430 reverse strand.

PAHARI_EIJ_v1.1:LT608302.1

About this gene

This gene has 4 transcripts (splice variants), 85 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0043734.1	H2-Aa-201	1131	256aa	MGP_PahariEiJ_P0043734	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0043735.1	H2-Aa-202	826	173aa	MGP_PahariEiJ_P0043735	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0043737.1	H2-Aa-204	649	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_PahariEiJ_T0043736.1	H2-Aa-203	665	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Summary

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