Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Ankrd54 MGP_PahariEiJ_G0020004

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Description

ankyrin repeat domain 54 [Source:NCBI gene;Acc:110334909]

Location

Chromosome 17: 44,192,522-44,203,407 reverse strand.

PAHARI_EIJ_v1.1:LT608298.1

About this gene

This gene has 5 transcripts (splice variants), 204 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0042254.1	Ankrd54-202	900	299aa	MGP_PahariEiJ_P0042254	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0042255.1	Ankrd54-203	689	201aa	MGP_PahariEiJ_P0042255	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0042256.1	Ankrd54-204	628	137aa	MGP_PahariEiJ_P0042256	Nonsense mediated decay	-
MGP_PahariEiJ_T0042253.1	Ankrd54-201	2631	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0042257.1	Ankrd54-205	2029	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Summary

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