Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Ptch1 MGP_PahariEiJ_G0019698

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Description

patched 1 [Source:NCBI gene;Acc:110333595]

Location

Chromosome 16: 65,918,469-65,983,778 reverse strand.

PAHARI_EIJ_v1.1:LT608294.1

About this gene

This gene has 7 transcripts (splice variants), 216 orthologues and 9 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0041329.1	Ptch1-201	7528	1434aa	MGP_PahariEiJ_P0041329	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0041333.1	Ptch1-205	1269	355aa	MGP_PahariEiJ_P0041333	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0041334.1	Ptch1-206	849	174aa	MGP_PahariEiJ_P0041334	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0041335.1	Ptch1-207	809	174aa	MGP_PahariEiJ_P0041335	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0041330.1	Ptch1-202	7597	581aa	MGP_PahariEiJ_P0041330	Nonsense mediated decay	-
MGP_PahariEiJ_T0041332.1	Ptch1-204	3422	426aa	MGP_PahariEiJ_P0041332	Nonsense mediated decay	-
MGP_PahariEiJ_T0041331.1	Ptch1-203	305	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Summary

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