Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Csnk1a1 MGP_PahariEiJ_G0019055

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Description

casein kinase 1 alpha 1 [Source:NCBI gene;Acc:110333354]

Location

Chromosome 15: 55,353,017-55,387,868 forward strand.

PAHARI_EIJ_v1.1:LT608295.1

About this gene

This gene has 10 transcripts (splice variants), 215 orthologues and 11 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0039452.1	Csnk1a1-207	2273	365aa	MGP_PahariEiJ_P0039452	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0039446.1	Csnk1a1-201	4136	325aa	MGP_PahariEiJ_P0039446	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0039450.1	Csnk1a1-205	3146	336aa	MGP_PahariEiJ_P0039450	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0039447.1	Csnk1a1-202	2337	337aa	MGP_PahariEiJ_P0039447	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0039449.1	Csnk1a1-204	1868	374aa	MGP_PahariEiJ_P0039449	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0039448.1	Csnk1a1-203	1498	334aa	MGP_PahariEiJ_P0039448	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0039453.1	Csnk1a1-208	1222	353aa	MGP_PahariEiJ_P0039453	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0039454.1	Csnk1a1-209	526	158aa	MGP_PahariEiJ_P0039454	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0039455.1	Csnk1a1-210	2891	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_PahariEiJ_T0039451.1	Csnk1a1-206	2306	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Summary

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