Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Apc MGP_PahariEiJ_G0018819

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Description

APC regulator of WNT signaling pathway [Source:NCBI gene;Acc:110333195]

Location

Chromosome 15: 29,357,888-29,456,482 forward strand.

PAHARI_EIJ_v1.1:LT608295.1

About this gene

This gene has 9 transcripts (splice variants), 217 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0038858.1	Apc-203	8867	2841aa	MGP_PahariEiJ_P0038858	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0038857.1	Apc-202	12376	2807aa	MGP_PahariEiJ_P0038857	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0038856.1	Apc-201	3590	1133aa	MGP_PahariEiJ_P0038856	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0038862.1	Apc-207	1182	323aa	MGP_PahariEiJ_P0038862	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0038863.1	Apc-208	2630	50aa	MGP_PahariEiJ_P0038863	Nonsense mediated decay	-
MGP_PahariEiJ_T0038860.1	Apc-205	618	20aa	MGP_PahariEiJ_P0038860	Nonsense mediated decay	-
MGP_PahariEiJ_T0038864.1	Apc-209	435	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_PahariEiJ_T0038861.1	Apc-206	2710	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0038859.1	Apc-204	1823	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Summary

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