Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Ubtf MGP_PahariEiJ_G0018378

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Description

upstream binding transcription factor [Source:NCBI gene;Acc:110331394]

Location

Chromosome 14: 69,755,051-69,769,587 reverse strand.

PAHARI_EIJ_v1.1:LT608308.1

About this gene

This gene has 9 transcripts (splice variants), 202 orthologues and 20 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0036948.1	Ubtf-201	4479	764aa	MGP_PahariEiJ_P0036948	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0036949.1	Ubtf-202	4483	727aa	MGP_PahariEiJ_P0036949	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0036951.1	Ubtf-204	3428	727aa	MGP_PahariEiJ_P0036951	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0036950.1	Ubtf-203	3197	727aa	MGP_PahariEiJ_P0036950	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0036952.1	Ubtf-205	3008	727aa	MGP_PahariEiJ_P0036952	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0036956.1	Ubtf-209	1065	169aa	MGP_PahariEiJ_P0036956	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0036955.1	Ubtf-208	727	151aa	MGP_PahariEiJ_P0036955	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0036954.1	Ubtf-207	667	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0036953.1	Ubtf-206	454	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Summary

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