Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Pfn1 MGP_PahariEiJ_G0017776

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Description

profilin 1 [Source:NCBI gene;Acc:110331523]

Location

Chromosome 14: 38,486,945-38,489,702 reverse strand.

PAHARI_EIJ_v1.1:LT608308.1

About this gene

This gene has 4 transcripts (splice variants), 159 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0034643.1	Pfn1-201	851	140aa	MGP_PahariEiJ_P0034643	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0034646.1	Pfn1-204	609	112aa	MGP_PahariEiJ_P0034646	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0034644.1	Pfn1-202	723	55aa	MGP_PahariEiJ_P0034644	Nonsense mediated decay	-
MGP_PahariEiJ_T0034645.1	Pfn1-203	1982	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Summary

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