Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Patz1 MGP_PahariEiJ_G0016884

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Description

POZ/BTB and AT hook containing zinc finger 1 [Source:NCBI gene;Acc:110330373]

Location

Chromosome 13: 25,963,807-25,983,899 reverse strand.

PAHARI_EIJ_v1.1:LT608299.1

About this gene

This gene has 12 transcripts (splice variants), 201 orthologues and 36 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0030650.1	Patz1-204	3703	687aa	MGP_PahariEiJ_P0030650	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0030648.1	Patz1-202	3173	537aa	MGP_PahariEiJ_P0030648	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0030651.1	Patz1-205	3118	641aa	MGP_PahariEiJ_P0030651	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0030654.1	Patz1-208	2922	537aa	MGP_PahariEiJ_P0030654	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0030649.1	Patz1-203	1904	102aa	MGP_PahariEiJ_P0030649	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0030653.1	Patz1-207	472	68aa	MGP_PahariEiJ_P0030653	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0030647.1	Patz1-201	1853	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_PahariEiJ_T0030652.1	Patz1-206	1249	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_PahariEiJ_T0030655.1	Patz1-209	853	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_PahariEiJ_T0030658.1	Patz1-212	802	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_PahariEiJ_T0030656.1	Patz1-210	646	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_PahariEiJ_T0030657.1	Patz1-211	464	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-

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Summary

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