Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: Runx1 MGP_PahariEiJ_G0016683

.

Description

RUNX family transcription factor 1 [Source:NCBI gene;Acc:110329713]

Location

Chromosome 12: 83,628,258-83,852,692 reverse strand.

PAHARI_EIJ_v1.1:LT608305.1

About this gene

This gene has 7 transcripts (splice variants), 206 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0029729.1	Runx1-201	5871	465aa	MGP_PahariEiJ_P0029729	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0029730.1	Runx1-202	4702	387aa	MGP_PahariEiJ_P0029730	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0029735.1	Runx1-207	2543	43aa	MGP_PahariEiJ_P0029735	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0029731.1	Runx1-203	1982	451aa	MGP_PahariEiJ_P0029731	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0029732.1	Runx1-204	520	63aa	MGP_PahariEiJ_P0029732	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0029734.1	Runx1-206	336	68aa	MGP_PahariEiJ_P0029734	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0029733.1	Runx1-205	3790	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

.

Summary

.

.