Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Mapk1 MGP_PahariEiJ_G0016206

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Description

mitogen-activated protein kinase 1 [Source:NCBI gene;Acc:110329343]

Location

Chromosome 12: 12,754,263-12,815,398 forward strand.

PAHARI_EIJ_v1.1:LT608305.1

About this gene

This gene has 9 transcripts (splice variants), 213 orthologues and 19 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0027958.1	Mapk1-202	5069	358aa	MGP_PahariEiJ_P0027958	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0027957.1	Mapk1-201	2387	358aa	MGP_PahariEiJ_P0027957	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0027959.1	Mapk1-203	1768	358aa	MGP_PahariEiJ_P0027959	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0027963.1	Mapk1-207	576	128aa	MGP_PahariEiJ_P0027963	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0027965.1	Mapk1-209	714	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_PahariEiJ_T0027964.1	Mapk1-208	630	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_PahariEiJ_T0027962.1	Mapk1-206	935	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0027961.1	Mapk1-205	614	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0027960.1	Mapk1-204	4503	332aa	MGP_PahariEiJ_P0027960	Unknown likely coding	-

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Summary

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