Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Irx2 MGP_PahariEiJ_G0015779

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Description

iroquois homeobox 2 [Source:NCBI gene;Acc:110328841]

Location

Chromosome 11: 4,564,679-4,570,033 forward strand.

PAHARI_EIJ_v1.1:LT608304.1

About this gene

This gene has 5 transcripts (splice variants), 186 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0026508.1	Irx2-201	2614	474aa	MGP_PahariEiJ_P0026508	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0026512.1	Irx2-205	558	13aa	MGP_PahariEiJ_P0026512	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0026510.1	Irx2-203	451	93aa	MGP_PahariEiJ_P0026510	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0026509.1	Irx2-202	515	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_PahariEiJ_T0026511.1	Irx2-204	922	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Summary

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