Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Cadm1 MGP_PahariEiJ_G0015032

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Description

cell adhesion molecule 1 [Source:NCBI gene;Acc:110328543]

Location

Chromosome 10: 42,666,300-42,996,037 forward strand.

PAHARI_EIJ_v1.1:LT608289.1

About this gene

This gene has 9 transcripts (splice variants), 277 orthologues and 13 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0023364.1	Cadm1-202	1784	475aa	MGP_PahariEiJ_P0023364	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0023363.1	Cadm1-201	4466	428aa	MGP_PahariEiJ_P0023363	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0023367.1	Cadm1-205	4431	446aa	MGP_PahariEiJ_P0023367	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0023366.1	Cadm1-204	2115	457aa	MGP_PahariEiJ_P0023366	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0023365.1	Cadm1-203	1643	390aa	MGP_PahariEiJ_P0023365	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0023371.1	Cadm1-209	1254	417aa	MGP_PahariEiJ_P0023371	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0023370.1	Cadm1-208	1101	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_PahariEiJ_T0023369.1	Cadm1-207	4769	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0023368.1	Cadm1-206	1354	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Summary

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