Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
- Paralogues
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Ontologies
Phenotypes
Genetic Variation
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Gene expression
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ID History
- Gene history

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Gene: Palb2 MGP_PahariEiJ_G0013627

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Description

partner and localizer of BRCA2 [Source:NCBI gene;Acc:110324783]

Location

Chromosome 1: 91,705,978-91,732,740 reverse strand.

PAHARI_EIJ_v1.1:LT608296.1

About this gene

This gene has 9 transcripts (splice variants) and 172 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0018745.1	Palb2-203	3926	1112aa	MGP_PahariEiJ_P0018745	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0018748.1	Palb2-206	3317	1035aa	MGP_PahariEiJ_P0018748	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0018744.1	Palb2-202	2551	742aa	MGP_PahariEiJ_P0018744	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0018743.1	Palb2-201	1545	385aa	MGP_PahariEiJ_P0018743	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0018749.1	Palb2-207	3194	38aa	MGP_PahariEiJ_P0018749	Nonsense mediated decay	-
MGP_PahariEiJ_T0018747.1	Palb2-205	1342	18aa	MGP_PahariEiJ_P0018747	Nonsense mediated decay	-
MGP_PahariEiJ_T0018750.1	Palb2-208	3145	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0018751.1	Palb2-209	1981	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_PahariEiJ_T0018746.1	Palb2-204	701	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Summary

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