Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Capn5 MGP_PahariEiJ_G0013233

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Description

calpain 5 [Source:NCBI gene;Acc:110319121]

Location

Chromosome 1: 68,936,505-68,992,050 reverse strand.

PAHARI_EIJ_v1.1:LT608296.1

About this gene

This gene has 5 transcripts (splice variants), 283 orthologues and 19 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_PahariEiJ_T0017612.1	Capn5-201	4507	640aa	MGP_PahariEiJ_P0017612	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_PahariEiJ_T0017613.1	Capn5-202	2226	640aa	MGP_PahariEiJ_P0017613	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0017617.1	Capn5-205	442	27aa	MGP_PahariEiJ_P0017617	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0017616.1	Capn5-204	379	46aa	MGP_PahariEiJ_P0017616	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_PahariEiJ_T0017615.1	Capn5-203	664	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-

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Summary

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