Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Itgb1 MGP_CAROLIEiJ_G0031735

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Description

integrin subunit beta 1 [Source:NCBI gene;Acc:110299930]

Location

Chromosome 8: 119,781,933-119,829,542 forward strand.

CAROLI_EIJ_v1.1:LT608237.1

About this gene

This gene has 5 transcripts (splice variants), 298 orthologues and 9 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_CAROLIEiJ_T0086610.1	Itgb1-202	3823	798aa	MGP_CAROLIEiJ_P0086610	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_CAROLIEiJ_T0086613.1	Itgb1-205	711	111aa	MGP_CAROLIEiJ_P0086613	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_CAROLIEiJ_T0086611.1	Itgb1-203	2910	58aa	MGP_CAROLIEiJ_P0086611	Nonsense mediated decay	-
MGP_CAROLIEiJ_T0086612.1	Itgb1-204	651	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_CAROLIEiJ_T0086609.1	Itgb1-201	3991	932aa	MGP_CAROLIEiJ_P0086609	Unknown likely coding	-

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Summary

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