Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Itgax MGP_CAROLIEiJ_G0030538

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Description

integrin alpha-X [Source:NCBI gene;Acc:110298506]

Location

Chromosome 7: 130,154,871-130,180,812 forward strand.

CAROLI_EIJ_v1.1:LT608243.1

About this gene

This gene has 5 transcripts (splice variants), 266 orthologues and 19 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_CAROLIEiJ_T0082608.1	Itgax-202	4047	1169aa	MGP_CAROLIEiJ_P0082608	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_CAROLIEiJ_T0082609.1	Itgax-203	1218	257aa	MGP_CAROLIEiJ_P0082609	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_CAROLIEiJ_T0082611.1	Itgax-205	523	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_CAROLIEiJ_T0082610.1	Itgax-204	352	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_CAROLIEiJ_T0082607.1	Itgax-201	3660	1138aa	MGP_CAROLIEiJ_P0082607	Unknown likely coding	-

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Summary

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