Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Htra2 MGP_CAROLIEiJ_G0028536

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Description

HtrA serine peptidase 2 [Source:NCBI gene;Acc:110295867]

Location

Chromosome 6: 79,200,363-79,204,295 reverse strand.

CAROLI_EIJ_v1.1:LT608245.1

About this gene

This gene has 11 transcripts (splice variants), 219 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_CAROLIEiJ_T0074473.1	Htra2-201	1725	458aa	MGP_CAROLIEiJ_P0074473	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_CAROLIEiJ_T0074474.1	Htra2-202	1629	426aa	MGP_CAROLIEiJ_P0074474	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_CAROLIEiJ_T0074475.1	Htra2-203	1500	426aa	MGP_CAROLIEiJ_P0074475	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_CAROLIEiJ_T0074479.1	Htra2-207	883	294aa	MGP_CAROLIEiJ_P0074479	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_CAROLIEiJ_T0074481.1	Htra2-209	746	248aa	MGP_CAROLIEiJ_P0074481	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_CAROLIEiJ_T0074476.1	Htra2-204	1605	328aa	MGP_CAROLIEiJ_P0074476	Nonsense mediated decay	-
MGP_CAROLIEiJ_T0074478.1	Htra2-206	745	136aa	MGP_CAROLIEiJ_P0074478	Nonsense mediated decay	-
MGP_CAROLIEiJ_T0074482.1	Htra2-210	768	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_CAROLIEiJ_T0074483.1	Htra2-211	650	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_CAROLIEiJ_T0074477.1	Htra2-205	2512	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_CAROLIEiJ_T0074480.1	Htra2-208	1096	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Summary

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