Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Cellular component
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Usp42 MGP_CAROLIEiJ_G0027985

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Description

ubiquitin specific peptidase 42 [Source:NCBI gene;Acc:110294566]

Location

Chromosome 5: 136,430,566-136,452,978 reverse strand.

CAROLI_EIJ_v1.1:LT608240.1

About this gene

This gene has 5 transcripts (splice variants), 262 orthologues and 45 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_CAROLIEiJ_T0072022.1	Usp42-201	5153	1324aa	MGP_CAROLIEiJ_P0072022	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_CAROLIEiJ_T0072023.1	Usp42-202	654	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_CAROLIEiJ_T0072024.1	Usp42-203	2572	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_CAROLIEiJ_T0072025.1	Usp42-204	2359	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_CAROLIEiJ_T0072026.1	Usp42-205	718	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Summary

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