Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Ptch2 MGP_CAROLIEiJ_G0026349

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Description

patched 2 [Source:NCBI gene;Acc:110292729]

Location

Chromosome 4: 107,545,643-107,566,731 forward strand.

CAROLI_EIJ_v1.1:LT608246.1

About this gene

This gene has 6 transcripts (splice variants), 209 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_CAROLIEiJ_T0063872.1	Ptch2-201	4378	1182aa	MGP_CAROLIEiJ_P0063872	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_CAROLIEiJ_T0063873.1	Ptch2-202	4352	337aa	MGP_CAROLIEiJ_P0063873	Nonsense mediated decay	-
MGP_CAROLIEiJ_T0063875.1	Ptch2-204	708	169aa	MGP_CAROLIEiJ_P0063875	Nonsense mediated decay	-
MGP_CAROLIEiJ_T0063877.1	Ptch2-206	2020	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_CAROLIEiJ_T0063876.1	Ptch2-205	590	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_CAROLIEiJ_T0063874.1	Ptch2-203	503	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Summary

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