Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Casq2 MGP_CAROLIEiJ_G0025436

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Description

calsequestrin 2 [Source:NCBI gene;Acc:110290919]

Location

Chromosome 3: 96,204,297-96,263,767 forward strand.

CAROLI_EIJ_v1.1:LT608232.1

About this gene

This gene has 5 transcripts (splice variants), 273 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_CAROLIEiJ_T0059531.1	Casq2-202	2437	415aa	MGP_CAROLIEiJ_P0059531	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_CAROLIEiJ_T0059530.1	Casq2-201	2558	412aa	MGP_CAROLIEiJ_P0059530	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_CAROLIEiJ_T0059532.1	Casq2-203	936	312aa	MGP_CAROLIEiJ_P0059532	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_CAROLIEiJ_T0059533.1	Casq2-204	628	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_CAROLIEiJ_T0059534.1	Casq2-205	560	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Summary

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