Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Arnt MGP_CAROLIEiJ_G0025343

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Description

aryl hydrocarbon receptor nuclear translocator [Source:MGI Symbol;Acc:MGI:88071]

Location

Chromosome 3: 89,521,424-89,578,755 forward strand.

CAROLI_EIJ_v1.1:LT608232.1

About this gene

This gene has 11 transcripts (splice variants), 215 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_CAROLIEiJ_T0059172.1	Arnt-202	2696	790aa	MGP_CAROLIEiJ_P0059172	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_CAROLIEiJ_T0059173.1	Arnt-203	4345	775aa	MGP_CAROLIEiJ_P0059173	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_CAROLIEiJ_T0059174.1	Arnt-204	4280	759aa	MGP_CAROLIEiJ_P0059174	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_CAROLIEiJ_T0059176.1	Arnt-206	2600	770aa	MGP_CAROLIEiJ_P0059176	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_CAROLIEiJ_T0059175.1	Arnt-205	749	76aa	MGP_CAROLIEiJ_P0059175	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_CAROLIEiJ_T0059180.1	Arnt-210	378	126aa	MGP_CAROLIEiJ_P0059180	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_CAROLIEiJ_T0059177.1	Arnt-207	3979	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_CAROLIEiJ_T0059178.1	Arnt-208	2828	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_CAROLIEiJ_T0059171.1	Arnt-201	2537	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_CAROLIEiJ_T0059179.1	Arnt-209	782	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_CAROLIEiJ_T0059181.1	Arnt-211	527	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Summary

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