Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Mmp9 MGP_CAROLIEiJ_G0024677

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Description

matrix metallopeptidase 9 [Source:MGI Symbol;Acc:MGI:97011]

Location

Chromosome 2: 156,889,473-156,904,927 forward strand.

CAROLI_EIJ_v1.1:LT608244.1

About this gene

This gene has 4 transcripts (splice variants), 214 orthologues and 23 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_CAROLIEiJ_T0056142.1	Mmp9-202	3150	730aa	MGP_CAROLIEiJ_P0056142	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_CAROLIEiJ_T0056141.1	Mmp9-201	428	67aa	MGP_CAROLIEiJ_P0056141	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_CAROLIEiJ_T0056144.1	Mmp9-204	1100	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_CAROLIEiJ_T0056143.1	Mmp9-203	453	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Summary

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