Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Cacna1b MGP_CAROLIEiJ_G0023239

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Description

calcium voltage-gated channel subunit alpha1 B [Source:NCBI gene;Acc:110289304]

Location

Chromosome 2: 20,477,243-20,649,219 reverse strand.

CAROLI_EIJ_v1.1:LT608244.1

About this gene

This gene has 10 transcripts (splice variants), 283 orthologues and 26 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_CAROLIEiJ_T0049952.1	Cacna1b-203	7182	2328aa	MGP_CAROLIEiJ_P0049952	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_CAROLIEiJ_T0049951.1	Cacna1b-202	9716	2325aa	MGP_CAROLIEiJ_P0049951	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_CAROLIEiJ_T0049950.1	Cacna1b-201	9633	2288aa	MGP_CAROLIEiJ_P0049950	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_CAROLIEiJ_T0049955.1	Cacna1b-206	6987	2328aa	MGP_CAROLIEiJ_P0049955	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_CAROLIEiJ_T0049954.1	Cacna1b-205	6984	2327aa	MGP_CAROLIEiJ_P0049954	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_CAROLIEiJ_T0049956.1	Cacna1b-207	684	228aa	MGP_CAROLIEiJ_P0049956	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_CAROLIEiJ_T0049953.1	Cacna1b-204	523	168aa	MGP_CAROLIEiJ_P0049953	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_CAROLIEiJ_T0049958.1	Cacna1b-209	332	110aa	MGP_CAROLIEiJ_P0049958	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_CAROLIEiJ_T0049959.1	Cacna1b-210	308	102aa	MGP_CAROLIEiJ_P0049959	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_CAROLIEiJ_T0049957.1	Cacna1b-208	949	113aa	MGP_CAROLIEiJ_P0049957	Nonsense mediated decay	-

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Summary

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