Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Csnk1a1 MGP_CAROLIEiJ_G0022325

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Description

casein kinase 1 alpha 1 [Source:NCBI gene;Acc:110284498]

Location

Chromosome 18: 58,358,795-58,393,308 forward strand.

CAROLI_EIJ_v1.1:LT608235.1

About this gene

This gene has 10 transcripts (splice variants), 215 orthologues and 11 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_CAROLIEiJ_T0046871.1	Csnk1a1-207	2266	365aa	MGP_CAROLIEiJ_P0046871	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_CAROLIEiJ_T0046865.1	Csnk1a1-201	4130	325aa	MGP_CAROLIEiJ_P0046865	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_CAROLIEiJ_T0046869.1	Csnk1a1-205	3225	336aa	MGP_CAROLIEiJ_P0046869	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_CAROLIEiJ_T0046866.1	Csnk1a1-202	2330	337aa	MGP_CAROLIEiJ_P0046866	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_CAROLIEiJ_T0046868.1	Csnk1a1-204	1867	376aa	MGP_CAROLIEiJ_P0046868	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_CAROLIEiJ_T0046867.1	Csnk1a1-203	1484	334aa	MGP_CAROLIEiJ_P0046867	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_CAROLIEiJ_T0046872.1	Csnk1a1-208	1222	353aa	MGP_CAROLIEiJ_P0046872	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_CAROLIEiJ_T0046873.1	Csnk1a1-209	526	158aa	MGP_CAROLIEiJ_P0046873	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_CAROLIEiJ_T0046874.1	Csnk1a1-210	2899	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_CAROLIEiJ_T0046870.1	Csnk1a1-206	2280	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Summary

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