Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: Apc MGP_CAROLIEiJ_G0022085

.

Description

APC, WNT signaling pathway regulator [Source:MGI Symbol;Acc:MGI:88039]

Location

Chromosome 18: 31,476,837-31,579,520 forward strand.

CAROLI_EIJ_v1.1:LT608235.1

About this gene

This gene has 10 transcripts (splice variants), 217 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_CAROLIEiJ_T0046254.1	Apc-202	8865	2841aa	MGP_CAROLIEiJ_P0046254	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_CAROLIEiJ_T0046255.1	Apc-203	12347	2807aa	MGP_CAROLIEiJ_P0046255	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_CAROLIEiJ_T0046253.1	Apc-201	3588	1133aa	MGP_CAROLIEiJ_P0046253	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_CAROLIEiJ_T0046259.1	Apc-207	1163	316aa	MGP_CAROLIEiJ_P0046259	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_CAROLIEiJ_T0046261.1	Apc-209	2630	50aa	MGP_CAROLIEiJ_P0046261	Nonsense mediated decay	-
MGP_CAROLIEiJ_T0046257.1	Apc-205	609	20aa	MGP_CAROLIEiJ_P0046257	Nonsense mediated decay	-
MGP_CAROLIEiJ_T0046262.1	Apc-210	435	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_CAROLIEiJ_T0046258.1	Apc-206	2692	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_CAROLIEiJ_T0046256.1	Apc-204	1822	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_CAROLIEiJ_T0046260.1	Apc-208	12279	2859aa	MGP_CAROLIEiJ_P0046260	Unknown likely coding	-

.

Summary

.

.