Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Zeb1 MGP_CAROLIEiJ_G0021973

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Description

zinc finger E-box binding homeobox 1 [Source:NCBI gene;Acc:110284749]

Location

Chromosome 18: 2,242,748-2,419,338 forward strand.

CAROLI_EIJ_v1.1:LT608235.1

About this gene

This gene has 12 transcripts (splice variants), 279 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_CAROLIEiJ_T0045951.1	Zeb1-201	5774	1114aa	MGP_CAROLIEiJ_P0045951	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_CAROLIEiJ_T0045955.1	Zeb1-205	853	283aa	MGP_CAROLIEiJ_P0045955	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_CAROLIEiJ_T0045957.1	Zeb1-207	774	154aa	MGP_CAROLIEiJ_P0045957	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_CAROLIEiJ_T0045953.1	Zeb1-203	1438	95aa	MGP_CAROLIEiJ_P0045953	Nonsense mediated decay	-
MGP_CAROLIEiJ_T0045954.1	Zeb1-204	1189	10aa	MGP_CAROLIEiJ_P0045954	Nonsense mediated decay	-
MGP_CAROLIEiJ_T0045962.1	Zeb1-212	2662	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_CAROLIEiJ_T0045960.1	Zeb1-210	1556	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_CAROLIEiJ_T0045958.1	Zeb1-208	819	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_CAROLIEiJ_T0045956.1	Zeb1-206	790	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_CAROLIEiJ_T0045959.1	Zeb1-209	2464	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_CAROLIEiJ_T0045952.1	Zeb1-202	1867	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_CAROLIEiJ_T0045961.1	Zeb1-211	5730	1107aa	MGP_CAROLIEiJ_P0045961	Unknown likely coding	-

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Summary

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