Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Cellular component
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: MGP_CAROLIEiJ_G0021543

.

Description

H-2 class I histocompatibility antigen, TLA(B) alpha chain [Source:NCBI gene;Acc:110283629]

Location

Chromosome 17: 32,909,649-32,914,393 reverse strand.

CAROLI_EIJ_v1.1:LT608229.1

About this gene

This gene has 10 transcripts (splice variants), 149 orthologues and 16 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_CAROLIEiJ_T0044640.1	-	2311	383aa	MGP_CAROLIEiJ_P0044640	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_CAROLIEiJ_T0044639.1	-	2116	340aa	MGP_CAROLIEiJ_P0044639	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_CAROLIEiJ_T0044646.1	-	205	68aa	MGP_CAROLIEiJ_P0044646	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_CAROLIEiJ_T0044642.1	-	1776	383aa	MGP_CAROLIEiJ_P0044642	Nonsense mediated decay	-
MGP_CAROLIEiJ_T0044644.1	-	1215	220aa	MGP_CAROLIEiJ_P0044644	Nonsense mediated decay	-
MGP_CAROLIEiJ_T0044645.1	-	1198	119aa	MGP_CAROLIEiJ_P0044645	Nonsense mediated decay	-
MGP_CAROLIEiJ_T0044647.1	-	675	44aa	MGP_CAROLIEiJ_P0044647	Nonsense mediated decay	-
MGP_CAROLIEiJ_T0044648.1	-	660	39aa	MGP_CAROLIEiJ_P0044648	Nonsense mediated decay	-
MGP_CAROLIEiJ_T0044641.1	-	2147	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_CAROLIEiJ_T0044643.1	-	1312	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

.

Summary

.

.