Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Ptch1 MGP_CAROLIEiJ_G0018634

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Description

patched 1 [Source:NCBI gene;Acc:110307775]

Location

Chromosome 13: 58,832,279-58,897,240 reverse strand.

CAROLI_EIJ_v1.1:LT608247.1

About this gene

This gene has 7 transcripts (splice variants), 216 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_CAROLIEiJ_T0034706.1	Ptch1-201	7096	1434aa	MGP_CAROLIEiJ_P0034706	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_CAROLIEiJ_T0034712.1	Ptch1-207	1126	327aa	MGP_CAROLIEiJ_P0034712	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_CAROLIEiJ_T0034710.1	Ptch1-205	849	174aa	MGP_CAROLIEiJ_P0034710	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_CAROLIEiJ_T0034711.1	Ptch1-206	809	174aa	MGP_CAROLIEiJ_P0034711	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_CAROLIEiJ_T0034707.1	Ptch1-202	7620	581aa	MGP_CAROLIEiJ_P0034707	Nonsense mediated decay	-
MGP_CAROLIEiJ_T0034709.1	Ptch1-204	3418	426aa	MGP_CAROLIEiJ_P0034709	Nonsense mediated decay	-
MGP_CAROLIEiJ_T0034708.1	Ptch1-203	306	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Summary

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