Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Camta2 MGP_CAROLIEiJ_G0016648

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Description

calmodulin binding transcription activator 2 [Source:NCBI gene;Acc:110306223]

Location

Chromosome 11: 65,431,611-65,449,955 reverse strand.

CAROLI_EIJ_v1.1:LT608241.1

About this gene

This gene has 9 transcripts (splice variants), 190 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_CAROLIEiJ_T0027913.1	Camta2-203	4495	1208aa	MGP_CAROLIEiJ_P0027913	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_CAROLIEiJ_T0027912.1	Camta2-202	4632	1203aa	MGP_CAROLIEiJ_P0027912	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_CAROLIEiJ_T0027917.1	Camta2-207	4460	1196aa	MGP_CAROLIEiJ_P0027917	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_CAROLIEiJ_T0027915.1	Camta2-205	4398	1179aa	MGP_CAROLIEiJ_P0027915	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_CAROLIEiJ_T0027911.1	Camta2-201	4383	1198aa	MGP_CAROLIEiJ_P0027911	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_CAROLIEiJ_T0027914.1	Camta2-204	4377	1172aa	MGP_CAROLIEiJ_P0027914	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_CAROLIEiJ_T0027916.1	Camta2-206	4406	181aa	MGP_CAROLIEiJ_P0027916	Nonsense mediated decay	-
MGP_CAROLIEiJ_T0027918.1	Camta2-208	4412	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_CAROLIEiJ_T0027919.1	Camta2-209	411	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Summary

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