Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Esr1 MGP_CAROLIEiJ_G0015086

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Description

estrogen receptor 1 [Source:NCBI gene;Acc:110303039]

Location

Chromosome 10: 1,360,444-1,727,110 forward strand.

CAROLI_EIJ_v1.1:LT608233.1

About this gene

This gene has 9 transcripts (splice variants), 210 orthologues and 8 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_CAROLIEiJ_T0022140.1	Esr1-202	6340	598aa	MGP_CAROLIEiJ_P0022140	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_CAROLIEiJ_T0022143.1	Esr1-205	4344	598aa	MGP_CAROLIEiJ_P0022143	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_CAROLIEiJ_T0022145.1	Esr1-207	2714	498aa	MGP_CAROLIEiJ_P0022145	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_CAROLIEiJ_T0022144.1	Esr1-206	2607	598aa	MGP_CAROLIEiJ_P0022144	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_CAROLIEiJ_T0022139.1	Esr1-201	2838	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_CAROLIEiJ_T0022146.1	Esr1-208	1343	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_CAROLIEiJ_T0022147.1	Esr1-209	927	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_CAROLIEiJ_T0022141.1	Esr1-203	2825	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_CAROLIEiJ_T0022142.1	Esr1-204	2100	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Summary

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