Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: Stat1 MGP_CAROLIEiJ_G0014128

.

Description

signal transducer and activator of transcription 1 [Source:NCBI gene;Acc:110304843]

Location

Chromosome 1: 41,915,041-41,956,718 reverse strand.

CAROLI_EIJ_v1.1:LT608242.1

About this gene

This gene has 12 transcripts (splice variants), 136 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_CAROLIEiJ_T0017582.1	Stat1-204	4017	755aa	MGP_CAROLIEiJ_P0017582	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_CAROLIEiJ_T0017579.1	Stat1-201	5172	749aa	MGP_CAROLIEiJ_P0017579	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_CAROLIEiJ_T0017581.1	Stat1-203	4258	749aa	MGP_CAROLIEiJ_P0017581	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_CAROLIEiJ_T0017580.1	Stat1-202	3319	243aa	MGP_CAROLIEiJ_P0017580	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_CAROLIEiJ_T0017585.1	Stat1-207	2837	712aa	MGP_CAROLIEiJ_P0017585	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_CAROLIEiJ_T0017584.1	Stat1-206	2806	712aa	MGP_CAROLIEiJ_P0017584	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_CAROLIEiJ_T0017586.1	Stat1-208	2578	712aa	MGP_CAROLIEiJ_P0017586	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_CAROLIEiJ_T0017589.1	Stat1-211	715	153aa	MGP_CAROLIEiJ_P0017589	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_CAROLIEiJ_T0017583.1	Stat1-205	885	130aa	MGP_CAROLIEiJ_P0017583	Nonsense mediated decay	-
MGP_CAROLIEiJ_T0017588.1	Stat1-210	1347	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_CAROLIEiJ_T0017587.1	Stat1-209	827	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_CAROLIEiJ_T0017590.1	Stat1-212	543	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

.

Summary

.

.