5-hydroxytryptamine (serotonin) receptor 2A
5-HT2A
Primary_assembly 3R: 4,612,870-4,633,304 forward strand.
BDGP6.46:AE014297.3
This gene has 5 transcripts (splice variants), 644 orthologues and 3 paralogues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| FBtr0078855 | 5-HT2A-RB | 3722 | 930aa | FBpp0078495 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C0PDE7 Q8IPN2 Q95RY6 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2, |
| FBtr0078854 | 5-HT2A-RA | 4355 | 868aa | FBpp0078494 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q24511 Q5MRC0 Q5MVC8 Q5MVF8 Q5MVH7 Q9VN38 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0339397 | 5-HT2A-RH | 3683 | 917aa | FBpp0308489 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A8JQT4 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0339395 | 5-HT2A-RF | 3541 | 916aa | FBpp0308487 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E1JJ46 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0300474 | 5-HT2A-RD | 3178 | 638aa | FBpp0289701 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5MRD0 Q5MRG2 Q5MRL4 Q5MRQ6 Q5MVI1 Q5MVI7 Q5MVN1 Q5MVS9 Q5MVX7 Q6AWQ4 | - |
