Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Tre1 FBgn0046687

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Description

Trapped in endoderm 1

Gene Synonyms

Tre1

Location

Primary_assembly X: 5,673,830-5,679,977 reverse strand.

BDGP6.46:AE014298.5

About this gene

This gene has 3 transcripts (splice variants), 8 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0340222	Tre1-RC	1655	399aa	FBpp0309197	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2JIG6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
FBtr0070848	Tre1-RA	1634	392aa	FBpp0070813	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9NGQ9 Q9NDM2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
FBtr0308339	Tre1-RB	1499	392aa	FBpp0300658	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9YIQ3 A9YIQ4 C6SUV0 D2CFN9 M9NGQ9 Q9NDM2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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