Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: sox6 ENSTRUG00000017299

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Description

SRY-box transcription factor 6 [Source:ZFIN;Acc:ZDB-GENE-081120-6]

Location

Primary_assembly 13: 18,206,806-18,291,204 forward strand.

fTakRub1.2:LR584232.1

About this gene

This gene has 8 transcripts (splice variants), 208 orthologues and 24 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSTRUT00000085261.1	sox6-201	3258	797aa	ENSTRUP00000079459.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSTRUT00000080686.1	sox6-202	3243	792aa	ENSTRUP00000075782.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSTRUT00000085062.1	sox6-203	3237	790aa	ENSTRUP00000080543.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSTRUT00000044478.3	sox6-204	3095	787aa	ENSTRUP00000044330.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2V546	-
ENSTRUT00000092254.1	sox6-205	2897	721aa	ENSTRUP00000058170.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSTRUT00000078668.1	sox6-208	2783	683aa	ENSTRUP00000069393.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSTRUT00000084608.1	sox6-206	2726	664aa	ENSTRUP00000073304.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSTRUT00000080981.1	sox6-207	2627	631aa	ENSTRUP00000083870.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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