Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: scn1laa ENSTRUG00000000558

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Description

sodium channel, voltage-gated, type I-like, alpha [Source:ZFIN;Acc:ZDB-GENE-040426-751]

Location

Primary_assembly 1: 19,956,724-19,974,912 reverse strand.

fTakRub1.2:LR584231.2

About this gene

This gene has 10 transcripts (splice variants), 80 orthologues and 28 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSTRUT00000072044.1	scn1laa-201	8327	1967aa	ENSTRUP00000088134.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSTRUT00000001324.3	scn1laa-202	8309	1961aa	ENSTRUP00000001318.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2RMF5	-
ENSTRUT00000063406.1	scn1laa-203	8288	1954aa	ENSTRUP00000082296.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSTRUT00000075418.1	scn1laa-204	8255	1943aa	ENSTRUP00000068672.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSTRUT00000079915.1	scn1laa-205	8234	1936aa	ENSTRUP00000079875.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSTRUT00000068059.1	scn1laa-206	8222	1932aa	ENSTRUP00000077953.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSTRUT00000069502.1	scn1laa-207	8198	1924aa	ENSTRUP00000059626.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSTRUT00000081673.1	scn1laa-208	8108	1894aa	ENSTRUP00000066608.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSTRUT00000076590.1	scn1laa-209	8015	1863aa	ENSTRUP00000066395.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSTRUT00000073655.1	scn1laa-210	7784	1786aa	ENSTRUP00000087402.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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