Human (GRCh38.p14)
Description

novel protein, SYNCRIP-SNX14 readthrough

Location
About this transcript

This transcript has 30 exons, is annotated with 1 domain and feature, is associated with 62011 variant alleles and maps to 906 oligo probes.

Gene
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000682083.1-5825562aaENSP00000506859.1
 
Nonsense mediated decay
CCDS55041--Ensembl CanonicalGENCODE basicAPPRIS P5
ENST00000683074.1-5581464aaENSP00000507008.1
 
Nonsense mediated decay
CCDS75491B7Z645 -APPRIS ALT1
ENST00000682504.1-5358464aaENSP00000507623.1
 
Nonsense mediated decay
CCDS75491B7Z645 -APPRIS ALT1
ENST00000681965.1-517020aaENSP00000507317.1
 
Nonsense mediated decay
A0A804HJ14 -APPRIS ALT2CDS 5' incomplete
ENST00000683364.1-5033562aaENSP00000507791.1
 
Nonsense mediated decay
CCDS55041--APPRIS P5
ENST00000684220.1-4904562aaENSP00000507382.1
 
Nonsense mediated decay
CCDS55041--APPRIS P5
ENST00000684462.1-3954464aaENSP00000507581.1
 
Nonsense mediated decay
CCDS75491B7Z645 -APPRIS ALT1
ENST00000683436.1-3950464aaENSP00000506874.1
 
Nonsense mediated decay
CCDS75491B7Z645 -APPRIS ALT1
ENST00000503906.1-83597aaENSP00000426494.1
 
Nonsense mediated decay
H0YAA0 -APPRIS ALT2TSL:5CDS 5' incomplete
ENST00000682106.1-5794No protein-
 
Protein coding CDS not defined
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ENST00000683909.1-5310No protein-
 
Retained intron
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Statistics

Exons: 30, Coding exons: 9, Transcript length: 3,950 bps, Translation length: 464 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS75491

Version

ENST00000683436.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.