Transcript: ENST00000672131.1 PODNL1-217

Description

podocan like 1 [Source:HGNC Symbol;Acc:HGNC:26275]

Gene Synonyms

FLJ23447, SLRR5B

Location

Scaffold HG109_PATCH: 143,313-165,222 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 34 domains and features and maps to 349 oligo probes.

Gene

This transcript is a product of gene ENSG00000288195.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq Match	Flags
ENST00000672449.1	PODNL1-220	2112	574aa	ENSP00000500019.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000672131.1	PODNL1-217	2744	421aa	ENSP00000500144.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6PEZ8-2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000672524.1	PODNL1-221	2165	505aa	ENSP00000500000.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000671723.1	PODNL1-214	1859	430aa	ENSP00000500364.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000672142.1	PODNL1-218	1826	510aa	ENSP00000499876.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6PEZ8-3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000672348.1	PODNL1-219	1073	135aa	ENSP00000499927.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000673043.1	PODNL1-223	739	164aa	ENSP00000499916.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000673052.1	PODNL1-224	562	32aa	ENSP00000500789.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000672870.1	PODNL1-222	545	182aa	ENSP00000499919.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000671772.1	PODNL1-215	537	123aa	ENSP00000500008.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000672070.1	PODNL1-216	454	151aa	ENSP00000499808.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000673567.1	PODNL1-225	502	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined	-	-	-
ENST00000673607.1	PODNL1-226	420	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined	-	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 2,744 bps, Translation length: 421 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6PEZ8

Version

ENST00000672131.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000672131.1 PODNL1-217

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Transcript: ENST00000672131.1 PODNL1-217

Summary

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