Human (GRCh38.p14)
Description

lysine demethylase 1B [Source:HGNC Symbol;Acc:HGNC:21577]

Gene Synonyms

AOF1, BA204B7.3, C6ORF193, DJ298J15.2, FLJ33898, FLJ34109, FLJ43328, LSD2

Location
About this transcript

This transcript has 22 exons, is annotated with 43 domains and features, is associated with 32731 variant alleles and maps to 788 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000650836.2KDM1B-2054538822aaENSP00000499208.1
 
Protein coding
CCDS93866Q8NB78-1 NM_001364614.2MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P4
ENST00000297792.9KDM1B-2013811590aaENSP00000297792.5
 
Protein coding
CCDS34343Q8NB78-2 -GENCODE basicTSL:2
ENST00000449850.2KDM1B-2022877823aaENSP00000405669.2
 
Protein coding
H0Y6H0 -GENCODE basicAPPRIS ALT1TSL:5
ENST00000546309.6KDM1B-203496113aaENSP00000442670.1
 
Protein coding
Q08EI0 -GENCODE basicTSL:1
ENST00000642162.1KDM1B-2043447No protein-
 
Retained intron
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Statistics

Exons: 22, Coding exons: 20, Transcript length: 4,538 bps, Translation length: 822 residues

MANE

This MANE Select transcript contains ENSP00000499208 and matches to NM_001364614.2 and NP_001351543.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8NB78

CCDS

This transcript is a member of the Human CCDS set: CCDS93866

Version

ENST00000650836.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.