Transcript: ENST00000648244.1 IL17A-201

Description

interleukin 17A [Source:HGNC Symbol;Acc:HGNC:5981]

Gene Synonyms

CTLA8, IL-17, IL-17A, IL17

Location

About this transcript

This transcript has 3 exons, is annotated with 72 domains and features, is associated with 1959 variant alleles and maps to 365 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000648244.1	IL17A-201	1871	155aa	ENSP00000497968.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4937	Q16552	NM_002190.3	The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select, A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 1,871 bps, Translation length: 155 residues

MANE

This MANE Select transcript contains ENSP00000497968 and matches to NM_002190.3 and NP_002181.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q16552

CCDS

This transcript is a member of the Human CCDS set: CCDS4937

Version

ENST00000648244.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.