Transcript: ENST00000641885.1 OR4K2-204

Description

olfactory receptor family 4 subfamily K member 2 [Source:HGNC Symbol;Acc:HGNC:14728]

Location

Chromosome 14: 19,875,142-19,883,932 forward strand.

About this transcript

This transcript has 2 exons, is annotated with 25 domains and features, is associated with 5465 variant alleles and maps to 146 oligo probes.

Gene

This transcript is a product of gene ENSG00000165762.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000641885.1	OR4K2-204	8681	314aa	ENSP00000493007.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32023	A0A126GVP5 Q8NGD2	NM_001005501.2	The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select, A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENST00000298642.2	OR4K2-201	1078	314aa	ENSP00000298642.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32023	A0A126GVP5 Q8NGD2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENST00000641522.1	OR4K2-202	6124	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-	-
ENST00000641785.1	OR4K2-203	5886	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 8,681 bps, Translation length: 314 residues

MANE

This MANE Select transcript contains ENSP00000493007 and matches to NM_001005501.2 and NP_001005501.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8NGD2

CCDS

This transcript is a member of the Human CCDS set: CCDS32023

Version

ENST00000641885.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000641885.1 OR4K2-204

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Transcript: ENST00000641885.1 OR4K2-204

Summary

About Us

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