Transcript: ENST00000641710.1 CD300H-202

Description

CD300H molecule (gene/pseudogene) [Source:HGNC Symbol;Acc:HGNC:52292]

Location

Chromosome 17: 74,560,701-74,567,343 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 1 domain and feature, is associated with 3633 variant alleles and maps to 187 oligo probes.

Gene

This transcript is a product of gene ENSG00000284690.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000641710.1	CD300H-202	606	201aa	ENSP00000492977.1	Protein coding LoF	CCDS86636	A0A0K2S4Q6-1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENST00000641031.1	CD300H-201	462	153aa	ENSP00000492997.1	Protein coding LoF	CCDS86635	A0A0K2S4Q6-2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 606 bps, Translation length: 201 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: A0A0K2S4Q6

CCDS

This transcript is a member of the Human CCDS set: CCDS86636

Version

ENST00000641710.1

Type

Protein coding LoF

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000641710.1 CD300H-202

Summary

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Transcript: ENST00000641710.1 CD300H-202

Summary

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