Transcript: ENST00000641256.1 OR1C1-202

Description

olfactory receptor family 1 subfamily C member 1 [Source:HGNC Symbol;Acc:HGNC:8182]

Gene Synonyms

HSTPCR27, TPCR27

Location

Chromosome 1: 247,754,846-247,760,556 reverse strand.

About this transcript

This transcript has 2 exons, is annotated with 26 domains and features, is associated with 2748 variant alleles and maps to 210 oligo probes.

Gene

This transcript is a product of gene ENSG00000221888.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000641256.1	OR1C1-202	3719	314aa	ENSP00000493457.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41481	A0A126GV94 Q15619	NM_012353.3	The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select, A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENST00000408896.4	OR1C1-201	1307	314aa	ENSP00000386138.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41481	A0A126GV94 Q15619	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 3,719 bps, Translation length: 314 residues

MANE

This MANE Select transcript contains ENSP00000493457 and matches to NM_012353.3 and NP_036485.2

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q15619

CCDS

This transcript is a member of the Human CCDS set: CCDS41481

Version

ENST00000641256.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000641256.1 OR1C1-202

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Transcript: ENST00000641256.1 OR1C1-202

Summary

About Us

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