Transcript: ENST00000637998.2 FRG1-230

Description

FSHD region gene 1 [Source:HGNC Symbol;Acc:HGNC:3954]

Gene Synonyms

FRG1A, FSG1

Location

Scaffold HSCHR4_11_CTG12: 33,802-56,122 forward strand.

About this transcript

This transcript has 9 exons, is annotated with 8 domains and features and maps to 672 oligo probes.

Gene

This transcript is a product of gene ENSG00000283630.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq Match	Flags
ENST00000637998.2	FRG1-230	978	258aa	ENSP00000489690.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q14331	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000636021.1	FRG1-224	755	102aa	ENSP00000490846.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9PLY7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000636883.1	FRG1-227	738	116aa	ENSP00000489702.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9PRR7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000711575.1	FRG1-231	874	190aa	ENSP00000518805.1	Nonsense mediated decay	-	-	-
ENST00000636553.1	FRG1-225	714	42aa	ENSP00000490222.1	Nonsense mediated decay	E9PI42	-	-
ENST00000636972.1	FRG1-228	421	84aa	ENSP00000489820.1	Nonsense mediated decay	J3KSQ7	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000637166.1	FRG1-229	838	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined	-	-	-
ENST00000636688.1	FRG1-226	340	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined	-	-	-
ENST00000711576.1	FRG1-232	3097	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 978 bps, Translation length: 258 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q14331

Version

ENST00000637998.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000637998.2 FRG1-230

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENST00000637998.2 FRG1-230

Summary

About Us

Get help

Our sister sites

Follow us