Human (GRCh38.p14)
Description

CLN5 intracellular trafficking protein [Source:HGNC Symbol;Acc:HGNC:2076]

Location
About this transcript

This transcript has 4 exons, is annotated with 6 domains and features, is associated with 6511 variant alleles and maps to 686 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000377453.9CLN5-2015243358aaENSP00000366673.5
 
Protein coding
CCDS9456O75503 NM_006493.4MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000636183.2CLN5-2086664358aaENSP00000490181.2
 
Protein coding
CCDS9456O75503 -GENCODE basicAPPRIS P1TSL:1
ENST00000637397.2CLN5-2185060273aaENSP00000490422.2
 
Protein coding
A0A1B0GV94 -GENCODE basicTSL:5
ENST00000636780.2CLN5-2162683197aaENSP00000489809.2
 
Protein coding
CCDS91815A0A1B0GTR6 -GENCODE basicTSL:5
ENST00000616833.6CLN5-2032527207aaENSP00000479547.3
 
Protein coding
A0A1C7CYZ2 -GENCODE basicTSL:5
ENST00000637537.2CLN5-2192520197aaENSP00000489711.2
 
Protein coding
CCDS91815A0A1B0GTR6 -GENCODE basicTSL:4
ENST00000636525.2CLN5-2112508270aaENSP00000490078.2
 
Protein coding
A0A1B0GUE8 -GENCODE basicTSL:5
ENST00000636705.1CLN5-2142408304aaENSP00000490937.1
 
Protein coding
A0A1B0GWI2 -TSL:5CDS 5' incomplete
ENST00000636767.2CLN5-2152368248aaENSP00000489855.2
 
Protein coding
A0A1B0GTV7 -GENCODE basicTSL:5
ENST00000485938.4CLN5-2022341191aaENSP00000482959.3
 
Protein coding
A0A087WZY0 -GENCODE basicTSL:2
ENST00000635915.1CLN5-2062517125aaENSP00000490560.1
 
Nonsense mediated decay
A0A1B0GVL0 -TSL:5CDS 5' incomplete
ENST00000636681.1CLN5-213179136aaENSP00000489922.1
 
Nonsense mediated decay
A0A1B0GU14 -TSL:5
ENST00000636405.1CLN5-2092511No protein-
 
Protein coding CDS not defined
--TSL:NA
ENST00000635989.1CLN5-207604No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000635761.1CLN5-204549No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000636520.1CLN5-2105889No protein-
 
Retained intron
--TSL:NA
ENST00000637278.1CLN5-2172863No protein-
 
Retained intron
--TSL:2
ENST00000635905.1CLN5-2052791No protein-
 
Retained intron
--TSL:5
ENST00000636602.1CLN5-212661No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 4, Coding exons: 4, Transcript length: 6,664 bps, Translation length: 358 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O75503

CCDS

This transcript is a member of the Human CCDS set: CCDS9456

Transcript Support Level (TSL)

TSL:1

Version

ENST00000636183.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Annotation Attributes

upstream ATG [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.