Human (GRCh38.p14)
Description

SRY-box transcription factor 13 [Source:HGNC Symbol;Acc:HGNC:11192]

Gene Synonyms

ICA12, MGC117216, SOX-13

About this transcript

This transcript has 13 exons, is annotated with 18 domains and features, is associated with 6826 variant alleles and maps to 504 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000367204.6SOX13-2034076622aaENSP00000356172.1
 
Protein coding
CCDS44299Q9UN79 NM_005686.3MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000618875.4SOX13-2103476622aaENSP00000478239.1
 
Protein coding
CCDS44299Q9UN79 -GENCODE basicAPPRIS P1TSL:1
ENST00000528591.5SOX13-207597179aaENSP00000436297.1
 
Protein coding
E9PPW0 -TSL:4CDS 3' incomplete
ENST00000525442.1SOX13-20653857aaENSP00000433595.1
 
Protein coding
E9PKD6 -TSL:4CDS 3' incomplete
ENST00000480326.1SOX13-204699128aaENSP00000434093.1
 
Nonsense mediated decay
H0YDQ5 -TSL:5CDS 5' incomplete
ENST00000367203.8SOX13-2023525No protein-
 
Protein coding CDS not defined
--TSL:1
ENST00000272193.10SOX13-2011754No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000530882.1SOX13-208769No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000534185.1SOX13-209723No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000525258.1SOX13-205744No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 13, Coding exons: 13, Transcript length: 3,476 bps, Translation length: 622 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UN79

CCDS

This transcript is a member of the Human CCDS set: CCDS44299

Transcript Support Level (TSL)

TSL:1

Version

ENST00000618875.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.