Transcript: ENST00000617316.2 ORAI1-202

Description

ORAI calcium release-activated calcium modulator 1 [Source:HGNC Symbol;Acc:HGNC:25896]

Gene Synonyms

CRACM1, FLJ14466, TMEM142A

Location

Chromosome 12: 121,626,550-121,642,040 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 14 domains and features, is associated with 9746 variant alleles and maps to 263 oligo probes.

Gene

This transcript is a product of gene ENSG00000276045.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq Match	Flags
ENST00000617316.2	ORAI1-202	1496	301aa	ENSP00000482568.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q96D31-1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000698901.1	ORAI1-204	2603	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined	-	-	-
ENST00000646827.1	ORAI1-203	2138	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined	-	-	-
ENST00000611718.1	ORAI1-201	852	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined	-	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 1,496 bps, Translation length: 301 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96D31

Transcript Support Level (TSL)

TSL:1

Version

ENST00000617316.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Frameshift introns

Frameshift introns occur at intron number(s) 1.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000617316.2 ORAI1-202

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENST00000617316.2 ORAI1-202

Summary

About Us

Get help

Our sister sites

Follow us