Transcript: ENST00000617227.1 PLA2G2D-202

Description

phospholipase A2 group IID [Source:HGNC Symbol;Acc:HGNC:9033]

Gene Synonyms

SPLA2S

Location

Chromosome 1: 20,112,657-20,119,566 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 8 domains and features, is associated with 3230 variant alleles and maps to 275 oligo probes.

Gene

This transcript is a product of gene ENSG00000117215.15 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000375105.8	PLA2G2D-201	2651	145aa	ENSP00000364246.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS203	Q9UNK4-1	NM_012400.4	The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select, A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000617227.1	PLA2G2D-202	1856	62aa	ENSP00000482871.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS72721	Q9UNK4-2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 1,856 bps, Translation length: 62 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UNK4

CCDS

This transcript is a member of the Human CCDS set: CCDS72721

Transcript Support Level (TSL)

TSL:1

Version

ENST00000617227.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000617227.1 PLA2G2D-202

Summary

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Transcript: ENST00000617227.1 PLA2G2D-202

Summary

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